Gerstein Lab FAQs

The most commonly asked questions from readers of our papers and users of our programs. For more information about our lab, visit http://www.gersteinlab.org/

Monday, October 26, 2009

Few Questions about PeakSeq and STAT1 Data

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I was hoping to use your STAT1 peak results to test a binding site prediction program that I am developing as part of my PhD project. I have...
435 comments:
Sunday, July 19, 2009

Submitting confidential files to Morph Server

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I would like to submit two confidential files to the protein Morph Server which contain heteroatoms – the cofactors FAD and NADP+. The serve...
95 comments:
Thursday, February 26, 2009

How to reconcile between the Pseudogene Family Database and Eukaryote Database?

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I found something misleading that the size of pseudogene protein families database is quite different with the Eukaryote Database. Say, gene...
Sunday, February 15, 2009

Huge discrepancy in the numbers in "Modeling ChIP Sequencing in Silico with Applications"

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In your article "Modeling ChIP Sequencing in Silico with Applications", you mentioned that the initial 2,915,382 sequence reads ob...
1 comment:
Tuesday, January 6, 2009

How do you submit private data to the morph server?

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How do you submit private data to the morph server? There is now a "Private" check box on the morph submission form. If checked, ...
1 comment:
Monday, November 3, 2008

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I have studied your article "The role of disorder in interaction networks :a structural analysis" . I am trying to get a list of h...
Monday, August 11, 2008

Where can I get access to the data driving PubNet?

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Where can I get access to the data driving PubNet? PubNet is based exclusively on PubMed, which you access via query or bulk download from ...
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